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Cogent Biosciences

Rare disease drugmaker · based in Waltham, United States · founded 2014 · ticker COGT · cogentbio.com

Cogent Biosciences works on 5 rare diseases we track, including Cholangiocarcinoma, Gastrointestinal Stromal Tumor and 3 more. It has 4 active clinical trials, and 1 is looking for volunteers now.

The FDA is due to decide on Bezuclastinib + sunitinib for Gastrointestinal stromal tumor (GIST), after imatinib by November 30, 2026.

The FDA is due to decide on Bezuclastinib for Nonadvanced systemic mastocytosis by December 30, 2026.

The FDA is due to decide on Bezuclastinib for Advanced systemic mastocytosis by June 29, 2027.

Email me the day the FDA decidesAll upcoming rare disease FDA decisions

Cogent Biosciences is a Waltham, Massachusetts biotech, with a second research site in Boulder, Colorado, that is on the verge of its first approvals. The company began life in 2014 as Unum Therapeutics, a cell therapy company that went public in 2018 and struggled.

Cogent Biosciences pipeline

Each row lists the diseases Cogent Biosciences is studying at that stage, from the ones closest to approval down to the earliest work.

At the FDA
Waiting on an FDA decision.

Bezuclastinib + sunitinib for Gastrointestinal stromal tumor (GIST), after imatinib, with a decision due by November 30, 2026.

Bezuclastinib for Nonadvanced systemic mastocytosis, with a decision due by December 30, 2026.

Bezuclastinib for Advanced systemic mastocytosis, with a decision due by June 29, 2027.

Phase 2
Mid-size studies that check whether a drug works and at what dose.

Cogent Biosciences clinical trials

These are Cogent Biosciences trials for the rare diseases we track, from ClinicalTrials.gov. Statuses there can lag behind company news, so confirm with the study team before you plan around one.

1 trial looking for volunteers now

Looking for volunteersPhase 2Recently updatedNCT04996875

(Apex) Bezuclastinib in Patients With Advanced Systemic Mastocytosis

Tests bezuclastinib

For Advanced Systemic Mastocytosis (AdvSM), SM With an Associated Hematologic Neoplasm (SM-AHN), Mast Cell Leukemia (MCL) and Aggressive Systemic Mastocytosis (ASM)

This is an open-label, two-part Phase 2 study investigating CGT9486 for the treatment of patients with Advanced Systemic Mastocytosis (AdvSM), including patients with Aggressive SM (ASM), SM with Associated Hematologic Neoplasm (SM-AHN), and Mast Cell Leukemia (MCL).

Ages 18 Years+42 locations
View full study

3 trials underway, not taking new volunteers

Underway, not taking new volunteersPhase 2Recently updatedNCT05186753

(Summit) A Study to Evaluate the Efficacy and Safety of CGT9486 Versus Placebo in Patients With Indolent or Smoldering Systemic Mastocytosis

Tests Bezuclastinib Tablets (Formulation A), Bezuclastinib Tablets (Formulation B), Placebo Tablets

For SSM, Mastocytosis, Indolent, Mastocytosis, Systemic, Mastocytosis and ISM

This is a multi-part, randomized, double-blind, placebo-controlled Phase 2 clinical study comparing the safety and efficacy of bezuclastinib (CGT9486) plus best supportive care (BSC) with placebo plus BSC in patients with nonadvanced systemic mastocytosis (NonAdvSM), including indolent systemic mastocytosis and smoldering systemic mastocytosis, whose symptoms are not adequately controlled by BSC. This study will be conducted in three parts. Patients in Parts 1a, 1b and 2 will receive bezuclastinib or placebo, and may roll over onto Part 3 to receive treatment with bezuclastinib. Additionally, a substudy of subjects will investigate the efficacy, safety, and tolerability of bezuclastinib in patients who are experiencing inadequate symptom control with avapritinib.

Ages 18 Years+57 locations
View full study
Underway, not taking new volunteersPhase 1/2No updates in a whileNCT06777316

A Study of an FGFR2/3 Inhibitor (CGT4859) in Patients With Cholangiocarcinoma and Other Advanced Solid Tumors

Tests CGT4859

For Intrahepatic Cholangiocarcinoma (Icc), Cholangiocarcinoma, Other Solid Tumors, Adult, FGFR2 Gene Fusion/Rearrangement and FGFR2 Gene Amplification

This is an open-label, phase 1/2 study evaluating the safety, tolerability, pharmacokinetic (what the body does to the drug), pharmacodynamic (what the drug does to the body), and antitumor activity of CGT4859 in adult participants with intrahepatic cholangiocarcinoma (iCCA) or other advanced solid tumors with FGFR2 and/or FGFR3 genetic alternations.

Ages 18 Years+13 locations
View full study
Underway, not taking new volunteersPhase 2No updates in a whileNCT06208748

SARC044: A Phase II Trial of Bezuclastinib in Combination With Sunitinib in Patients With GIST

Tests Bezuclastinib in combination with sunitinib

For Gastrointestinal Stromal Tumors and GIST

This is an open label, single arm, phase 2 trial investigating bezuclastinib plus sunitinib in patients with GIST who have previously progressed on sunitinib.

Ages 18 Years+4 locations
View full study
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More about Cogent Biosciences

In July 2020 it acquired Kiq, a private company holding the rights to a KIT inhibitor originally discovered at Plexxikon, renamed itself Cogent Biosciences that October under CEO Andrew Robbins, and wound down the cell therapy work. Everything since has been built around that one molecule, bezuclastinib, and Cogent trades on Nasdaq as COGT.

Bezuclastinib is a pill designed to block a specific mutant form of the KIT protein, KIT D816V, which drives roughly 90 to 95% of systemic mastocytosis, a rare disease in which abnormal mast cells accumulate in the bone marrow, skin, and organs.

What sets it apart from earlier KIT drugs is selectivity: it is built to hit the mutant protein while largely sparing related enzymes, and it was designed to stay out of the brain, which is meant to avoid the cognitive side effects seen with avapritinib (Ayvakit), the only approved targeted therapy in this space.

In the placebo-controlled SUMMIT trial in non-advanced systemic mastocytosis, reported in July 2025, patients on bezuclastinib had a significantly larger drop in total symptom score at 24 weeks than patients on placebo, and 87% saw their serum tryptase fall by at least half, compared with none on placebo. The most common side effects were hair color change and altered taste, with liver enzyme elevations in about one in five patients.

Keep reading about Cogent Biosciences

The FDA accepted the application with a decision date of December 30, 2026. In the single-arm APEX trial in advanced systemic mastocytosis, a more aggressive form that often overlaps with blood cancers, 65% of evaluable patients responded, and Cogent submitted that application on June 30, 2026.

The third indication is gastrointestinal stromal tumor (GIST), another cancer driven by KIT mutations.

In the Phase 3 PEAK trial, reported in November 2025 and presented at ASCO in 2026, adding bezuclastinib to sunitinib in patients whose GIST had progressed on imatinib cut the risk of progression or death in half, extending median progression-free survival from 9.2 to 16.5 months, the first positive Phase 3 result in second-line GIST in more than two decades.

The FDA granted priority review with a decision date of November 30, 2026. Cogent has hired its full commercial field team, signed a long-term manufacturing agreement in September 2026, and offers expanded access programs in both systemic mastocytosis and GIST for patients who cannot join a trial.

Behind bezuclastinib, the company has three early-stage precision cancer drugs in Phase 1: CGT4859 for FGFR2 and FGFR3-driven tumors including bile duct cancer, CGT4255 for HER2-mutant cancers, and CGT6297 for PIK3CA-mutant breast and endometrial cancers, plus preclinical programs against pan-KRAS and the JAK2 V617F mutation behind polycythemia vera and other myeloproliferative neoplasms.

With $866 million in cash on a pro forma basis at mid-2026, Cogent says it is funded into late 2028.

Where Cogent Biosciences trials take place

The trials above run at 116 study sites in 16 countries. Tap a country to see its states, cities and hospitals.

United States
54▼
Germany
9▼
Italy
9▼
Spain
7▼
Canada
6▼
Australia
5▼
France
5▼
United Kingdom
4▼
Belgium
3▼
Netherlands
3▼
Poland
3▼
Norway
2▼

Rare diseases Cogent Biosciences works on

Each disease page lists every open trial, not only Cogent Biosciences's, plus approved treatments.

Cholangiocarcinoma

Cholangiocarcinoma is a rare and aggressive cancer that forms in the bile ducts, the thin tubes that carry digestive fluid (bile) from the liver to the small intestine.

How common: About 8,000 new cases per year in the U.S.; rising incidence worldwide

Gastrointestinal Stromal Tumor

Gastrointestinal stromal tumors (GISTs) are the most common mesenchymal tumors of the gastrointestinal tract, arising from the interstitial cells of Cajal or their precursors.

How common: About 6,000 new cases per year in the U.S. (American Cancer Society); true incidence may be higher as small GISTs are often incidentally discovered

Mastocytosis

Mastocytosis is a rare hematological disorder characterized by clonal expansion of mast cells in bone marrow, organs, and tissues.

How common: 1 in 10,000 to 1 in 300,000 (estimates vary widely)

Multiple Myeloma

Multiple myeloma is a cancer of plasma cells, the white blood cells that make antibodies.

How common: About 36,000 new US diagnoses expected in 2026 and roughly 203,000 people living with it, which puts myeloma right at the edge of the US rare disease threshold; it is 1.7% of all new cancers (NCI SEER)

Systemic Mastocytosis

Systemic Mastocytosis is a rare hematologic disorder characterized by accumulation and proliferation of abnormal mast cells in bone marrow, lymphoid tissues, and other organs.

How common: Approximately 1 case per 10,000 to 20,000 people; can occur at any age but more common in adults

Where to get support

Patient groups can explain a diagnosis, point you to specialists and tell you about trials before they open. Cogent Biosciences's own site is cogentbio.com, and our help paying for treatment page lists drugmaker programs and charity funds.

Questions about Cogent Biosciences